Migrate documents table to use collection names instead of IDs
Schema changes: - documents.collection_id (INTEGER FK) → documents.collection (TEXT) - Update UNIQUE constraint to (collection, path) - Update indices to use collection name - Update FTS triggers to compute filepath from collection || '/' || path Code changes in store.ts: - Change all function parameters from collectionId: number to collectionName: string - Update all SQL queries to use d.collection instead of d.collection_id - Remove unnecessary JOINs where collection name is already available - Update DocumentResult type: collectionId → collectionName - Update renameCollection() to also update documents.collection Successfully migrated 2309 documents across 6 collections. This prepares for YAML-based collection configuration where collections table will be removed and collection names will be the primary identifier. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
This commit is contained in:
Tobi Lutke
parent
8f49b51db2
commit
5f68faa853
@ -7,7 +7,7 @@
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{"id":"qmd-4u4","title":"Move embedding/vector DB operations to store.ts","description":"Move vector indexing DB operations from vectorIndex() to store.ts. Create methods like getHashesForEmbedding(), insertEmbedding(), clearEmbeddings(), etc.","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-12T16:36:21.683434-05:00","updated_at":"2025-12-12T16:42:40.42653-05:00","closed_at":"2025-12-12T16:42:40.42653-05:00","dependencies":[{"issue_id":"qmd-4u4","depends_on_id":"qmd-29c","type":"parent-child","created_at":"2025-12-12T16:37:02.944591-05:00","created_by":"daemon"}]}
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{"id":"qmd-6s5","title":"Export current database to index.yml","description":"Write a script to export current collections and path_contexts from SQLite to ~/.config/qmd/index.yml format. Include all collection metadata and contexts.","status":"closed","priority":1,"issue_type":"task","created_at":"2025-12-13T09:54:52.707844-05:00","updated_at":"2025-12-13T09:57:36.650437-05:00","closed_at":"2025-12-13T09:57:36.650437-05:00","dependencies":[{"issue_id":"qmd-6s5","depends_on_id":"qmd-3z9","type":"blocks","created_at":"2025-12-13T09:55:07.606834-05:00","created_by":"daemon"}]}
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{"id":"qmd-7ss","title":"remove all the symlinks and stuff in the git repo, clean up the root directory","description":"","status":"closed","priority":4,"issue_type":"task","created_at":"2025-12-12T16:40:00.744982-05:00","updated_at":"2025-12-12T17:11:18.034215-05:00","closed_at":"2025-12-12T17:11:18.034215-05:00"}
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{"id":"qmd-8eu","title":"Update documents table schema for collection names","description":"Change documents.collection_id (integer FK) to documents.collection (text). Update all queries and indices. Keep backwards compatibility during transition.","design":"Schema change:\n- Add `collection TEXT` column\n- Migrate data: UPDATE documents SET collection = (SELECT name FROM collections WHERE id = collection_id)\n- Drop collection_id column\n- Update FTS5 trigger\n- Update all queries in store.ts","status":"open","priority":1,"issue_type":"task","created_at":"2025-12-13T09:54:52.830305-05:00","updated_at":"2025-12-13T09:54:52.830305-05:00","dependencies":[{"issue_id":"qmd-8eu","depends_on_id":"qmd-6s5","type":"blocks","created_at":"2025-12-13T09:55:07.662048-05:00","created_by":"daemon"}]}
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{"id":"qmd-8eu","title":"Update documents table schema for collection names","description":"Change documents.collection_id (integer FK) to documents.collection (text). Update all queries and indices. Keep backwards compatibility during transition.","design":"Schema change:\n- Add `collection TEXT` column\n- Migrate data: UPDATE documents SET collection = (SELECT name FROM collections WHERE id = collection_id)\n- Drop collection_id column\n- Update FTS5 trigger\n- Update all queries in store.ts","status":"in_progress","priority":1,"issue_type":"task","created_at":"2025-12-13T09:54:52.830305-05:00","updated_at":"2025-12-13T09:57:58.370734-05:00","dependencies":[{"issue_id":"qmd-8eu","depends_on_id":"qmd-6s5","type":"blocks","created_at":"2025-12-13T09:55:07.662048-05:00","created_by":"daemon"}]}
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{"id":"qmd-9ua","title":"Update all qmd commands for YAML-based collections","description":"Update qmd.ts commands: collection add/list/remove/rename, status, update, ls. All should use collections.ts instead of store.ts collection functions.","status":"open","priority":1,"issue_type":"task","created_at":"2025-12-13T09:54:53.14644-05:00","updated_at":"2025-12-13T09:54:53.14644-05:00","dependencies":[{"issue_id":"qmd-9ua","depends_on_id":"qmd-u84","type":"blocks","created_at":"2025-12-13T09:55:07.893268-05:00","created_by":"daemon"},{"issue_id":"qmd-9ua","depends_on_id":"qmd-oxy","type":"blocks","created_at":"2025-12-13T09:55:07.942221-05:00","created_by":"daemon"}]}
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{"id":"qmd-afe","title":"implement qmd collection rename, which changes the global path prefix for the collection","description":"","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-12T15:55:54.779325-05:00","updated_at":"2025-12-12T16:29:24.153196-05:00","closed_at":"2025-12-12T16:29:24.153196-05:00"}
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{"id":"qmd-ama","title":"Refactor database system","description":"All documents should be stored as content addressable hash, e.g. hash, doc, created_at,\n┃ updated_at. documents should be a file system layer on top e.g. collection, path, hash,\n┃ created_at, updated_at. (collection,path)\n┃\n┃\n\n┃ All documents should be stored as content addressable hash, e.g. hash, doc, created_at,\n┃ updated_at. documents should be a file system layer on top e.g. collection_id, path, hash,\n┃ created_at, updated_at. (collection,path) is unique. There is also collection which stores PWD\n┃ + glob pattern, name (\\w+). Every document is treated as path qmd://collection.name/","notes":"## Completed\n- ✅ Implemented content-addressable storage (content table with hash→doc mapping)\n- ✅ Refactored documents table as file system layer (collection_id, path, hash)\n- ✅ Added collection names (e.g., \"pages\", \"journals\", \"archive\")\n- ✅ Implemented virtual paths (qmd://collection-name/path/to/file.md)\n- ✅ Added hierarchical context support (collection-scoped)\n- ✅ Successfully migrated existing database\n- ✅ Updated search functions to work with new schema\n- ✅ Updated indexing logic to use content-addressable storage\n- ✅ Orphaned content hash cleanup\n\n## Still TODO\n- Fix migration SQL to properly extract basename (currently needs manual fix)\n- Implement `qmd collection add . --name \u003cname\u003e --mask '**/*.md'`\n- Implement `qmd ls [path]` for exploring virtual file tree","status":"closed","priority":2,"issue_type":"task","created_at":"2025-12-10T10:57:35.497489-05:00","updated_at":"2025-12-12T15:39:48.879143-05:00","closed_at":"2025-12-12T15:39:48.879143-05:00"}
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162
migrate-schema.ts
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162
migrate-schema.ts
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@ -0,0 +1,162 @@
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#!/usr/bin/env bun
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/**
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* Migrate documents table from collection_id to collection name
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*
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* This script updates the database schema to use collection names
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* instead of collection_id foreign keys, preparing for YAML-based
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* collection management.
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*/
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import { Database } from "bun:sqlite";
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import { join } from "path";
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import { homedir } from "os";
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const c = {
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reset: "\x1b[0m",
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cyan: "\x1b[36m",
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green: "\x1b[32m",
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yellow: "\x1b[33m",
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dim: "\x1b[2m",
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};
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const dbPath = join(homedir(), ".cache", "qmd", "index.sqlite");
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console.log(`${c.cyan}Migrating database schema...${c.reset}\n`);
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console.log(`Database: ${dbPath}\n`);
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const db = new Database(dbPath);
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try {
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db.exec("BEGIN TRANSACTION");
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// Step 1: Add collection column to documents
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console.log(`${c.yellow}1. Adding 'collection' column to documents table...${c.reset}`);
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db.exec(`ALTER TABLE documents ADD COLUMN collection TEXT`);
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console.log(` ${c.green}✓${c.reset} Column added`);
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// Step 2: Populate collection names from collections table
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console.log(`\n${c.yellow}2. Populating collection names...${c.reset}`);
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const result = db.exec(`
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UPDATE documents
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SET collection = (
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SELECT name FROM collections WHERE collections.id = documents.collection_id
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)
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WHERE collection IS NULL
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`);
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console.log(` ${c.green}✓${c.reset} Updated ${result} rows`);
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// Step 3: Verify no NULL values
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const nullCount = db.query<{ count: number }, []>(
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`SELECT COUNT(*) as count FROM documents WHERE collection IS NULL`
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).get();
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if (nullCount && nullCount.count > 0) {
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throw new Error(`Found ${nullCount.count} documents with NULL collection names`);
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}
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console.log(` ${c.green}✓${c.reset} All documents have collection names`);
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// Step 4: Create new documents table without collection_id
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console.log(`\n${c.yellow}3. Creating new documents table...${c.reset}`);
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db.exec(`
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CREATE TABLE documents_new (
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id INTEGER PRIMARY KEY AUTOINCREMENT,
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collection TEXT NOT NULL,
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path TEXT NOT NULL,
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title TEXT NOT NULL,
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hash TEXT NOT NULL,
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created_at TEXT NOT NULL,
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modified_at TEXT NOT NULL,
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active INTEGER DEFAULT 1,
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FOREIGN KEY (hash) REFERENCES content(hash) ON DELETE CASCADE,
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UNIQUE(collection, path)
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)
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`);
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console.log(` ${c.green}✓${c.reset} New table created`);
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// Step 5: Copy data
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console.log(`\n${c.yellow}4. Copying data to new table...${c.reset}`);
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db.exec(`
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INSERT INTO documents_new (id, collection, path, title, hash, created_at, modified_at, active)
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SELECT id, collection, path, title, hash, created_at, modified_at, active
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FROM documents
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`);
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const rowCount = db.query<{ count: number }, []>(
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`SELECT COUNT(*) as count FROM documents_new`
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).get();
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console.log(` ${c.green}✓${c.reset} Copied ${rowCount?.count} documents`);
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// Step 6: Drop old table and rename new one
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console.log(`\n${c.yellow}5. Replacing old table...${c.reset}`);
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db.exec(`DROP TABLE documents`);
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db.exec(`ALTER TABLE documents_new RENAME TO documents`);
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console.log(` ${c.green}✓${c.reset} Table replaced`);
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// Step 7: Recreate indices
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console.log(`\n${c.yellow}6. Recreating indices...${c.reset}`);
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db.exec(`CREATE INDEX idx_documents_collection ON documents(collection, active)`);
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db.exec(`CREATE INDEX idx_documents_hash ON documents(hash)`);
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console.log(` ${c.green}✓${c.reset} Indices created`);
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// Step 8: Update FTS trigger to use collection name
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console.log(`\n${c.yellow}7. Updating FTS trigger...${c.reset}`);
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db.exec(`DROP TRIGGER IF EXISTS documents_ai`);
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db.exec(`
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CREATE TRIGGER documents_ai AFTER INSERT ON documents
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WHEN new.active = 1
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BEGIN
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INSERT INTO documents_fts(rowid, filepath, title, body)
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SELECT
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new.id,
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new.collection || '/' || new.path,
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new.title,
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(SELECT doc FROM content WHERE hash = new.hash)
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WHERE new.active = 1;
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END
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`);
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db.exec(`DROP TRIGGER IF EXISTS documents_au`);
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db.exec(`
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CREATE TRIGGER documents_au AFTER UPDATE ON documents
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BEGIN
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-- Delete from FTS if no longer active
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DELETE FROM documents_fts WHERE rowid = old.id AND new.active = 0;
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-- Update FTS if still/newly active
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INSERT OR REPLACE INTO documents_fts(rowid, filepath, title, body)
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SELECT
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new.id,
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new.collection || '/' || new.path,
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new.title,
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(SELECT doc FROM content WHERE hash = new.hash)
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WHERE new.active = 1;
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END
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`);
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console.log(` ${c.green}✓${c.reset} Triggers updated`);
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// Commit transaction
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db.exec("COMMIT");
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console.log(`\n${c.green}✓ Migration completed successfully!${c.reset}`);
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// Show summary
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const collections = db.query<{ collection: string; count: number }, []>(`
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SELECT collection, COUNT(*) as count
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FROM documents
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WHERE active = 1
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GROUP BY collection
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ORDER BY collection
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`).all();
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console.log(`\n${c.dim}Documents by collection:${c.reset}`);
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for (const coll of collections) {
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console.log(` ${coll.collection}: ${coll.count} files`);
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}
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} catch (error) {
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db.exec("ROLLBACK");
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console.error(`\n${c.yellow}✗ Migration failed:${c.reset} ${error}`);
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console.error(`${c.dim}Database rolled back to previous state${c.reset}`);
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process.exit(1);
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} finally {
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db.close();
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}
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290
src/store.ts
290
src/store.ts
@ -148,9 +148,9 @@ export function resolveVirtualPath(db: Database, virtualPath: string): string |
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*/
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export function toVirtualPath(db: Database, absolutePath: string): string | null {
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const doc = db.prepare(`
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SELECT c.name, d.path
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SELECT d.collection as name, d.path
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FROM documents d
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JOIN collections c ON c.id = d.collection_id
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JOIN collections c ON c.name = d.collection
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WHERE c.pwd || '/' || d.path = ? AND d.active = 1
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LIMIT 1
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`).get(absolutePath) as { name: string; path: string } | null;
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@ -214,20 +214,19 @@ function initializeDatabase(db: Database): void {
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db.exec(`
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CREATE TABLE IF NOT EXISTS documents (
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id INTEGER PRIMARY KEY AUTOINCREMENT,
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collection_id INTEGER NOT NULL,
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collection TEXT NOT NULL,
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path TEXT NOT NULL,
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title TEXT NOT NULL,
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hash TEXT NOT NULL,
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created_at TEXT NOT NULL,
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modified_at TEXT NOT NULL,
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active INTEGER NOT NULL DEFAULT 1,
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FOREIGN KEY (collection_id) REFERENCES collections(id) ON DELETE CASCADE,
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FOREIGN KEY (hash) REFERENCES content(hash) ON DELETE CASCADE,
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UNIQUE(collection_id, path)
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UNIQUE(collection, path)
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)
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`);
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db.exec(`CREATE INDEX IF NOT EXISTS idx_documents_collection ON documents(collection_id, active)`);
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db.exec(`CREATE INDEX IF NOT EXISTS idx_documents_collection ON documents(collection, active)`);
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db.exec(`CREATE INDEX IF NOT EXISTS idx_documents_hash ON documents(hash)`);
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db.exec(`CREATE INDEX IF NOT EXISTS idx_documents_path ON documents(path, active)`);
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@ -346,16 +345,15 @@ function migrateToContentAddressable(db: Database): void {
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db.exec(`
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CREATE TABLE documents (
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id INTEGER PRIMARY KEY AUTOINCREMENT,
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collection_id INTEGER NOT NULL,
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collection TEXT NOT NULL,
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path TEXT NOT NULL,
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title TEXT NOT NULL,
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hash TEXT NOT NULL,
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created_at TEXT NOT NULL,
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modified_at TEXT NOT NULL,
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active INTEGER NOT NULL DEFAULT 1,
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FOREIGN KEY (collection_id) REFERENCES collections(id) ON DELETE CASCADE,
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FOREIGN KEY (hash) REFERENCES content(hash) ON DELETE CASCADE,
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UNIQUE(collection_id, path)
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UNIQUE(collection, path)
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)
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`);
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@ -422,7 +420,7 @@ function migrateToContentAddressable(db: Database): void {
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// Migrate documents: convert filepath to relative path within collection
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console.log("Migrating documents...");
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const oldDocs = db.prepare(`
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SELECT d.id, d.collection_id, d.filepath, d.title, d.hash, d.created_at, d.modified_at, c.pwd
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SELECT d.id, d.collection_id, d.filepath, d.title, d.hash, d.created_at, d.modified_at, c.pwd, c.name
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FROM documents_old d
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JOIN collections c ON c.id = d.collection_id
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WHERE d.active = 1
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@ -435,10 +433,11 @@ function migrateToContentAddressable(db: Database): void {
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created_at: string;
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modified_at: string;
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pwd: string;
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name: string;
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}>;
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const insertDoc = db.prepare(`
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INSERT INTO documents (collection_id, path, title, hash, created_at, modified_at, active)
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INSERT INTO documents (collection, path, title, hash, created_at, modified_at, active)
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VALUES (?, ?, ?, ?, ?, ?, 1)
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`);
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@ -454,9 +453,9 @@ function migrateToContentAddressable(db: Database): void {
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path = path.replace(/^\/+/, '');
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try {
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insertDoc.run(doc.collection_id, path, doc.title, doc.hash, doc.created_at, doc.modified_at);
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insertDoc.run(doc.name, path, doc.title, doc.hash, doc.created_at, doc.modified_at);
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} catch (e) {
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console.warn(`Skipping duplicate path: ${path} in collection ${doc.collection_id}`);
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console.warn(`Skipping duplicate path: ${path} in collection ${doc.name}`);
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}
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}
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@ -545,7 +544,7 @@ function migrateToContentAddressable(db: Database): void {
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`);
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// Create indexes
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db.exec(`CREATE INDEX idx_documents_collection ON documents(collection_id, active)`);
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db.exec(`CREATE INDEX idx_documents_collection ON documents(collection, active)`);
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db.exec(`CREATE INDEX idx_documents_hash ON documents(hash)`);
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db.exec(`CREATE INDEX idx_documents_path ON documents(path, active)`);
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db.exec(`CREATE INDEX idx_path_contexts_collection ON path_contexts(collection_id, path_prefix)`);
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@ -602,11 +601,11 @@ export type Store = {
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// Context
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getContextForFile: (filepath: string) => string | null;
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getContextForPath: (collectionId: number, path: string) => string | null;
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getContextForPath: (collectionName: string, path: string) => string | null;
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getCollectionIdByName: (name: string) => number | null;
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getCollectionByName: (name: string) => { id: number; name: string; pwd: string; glob_pattern: string } | null;
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getCollectionsWithoutContext: () => { id: number; name: string; pwd: string; doc_count: number }[];
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getTopLevelPathsWithoutContext: (collectionId: number) => string[];
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getTopLevelPathsWithoutContext: (collectionName: string) => string[];
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// Virtual paths
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parseVirtualPath: typeof parseVirtualPath;
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@ -638,12 +637,12 @@ export type Store = {
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// Document indexing operations
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insertContent: (hash: string, content: string, createdAt: string) => void;
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insertDocument: (collectionId: number, path: string, title: string, hash: string, createdAt: string, modifiedAt: string) => void;
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findActiveDocument: (collectionId: number, path: string) => { id: number; hash: string; title: string } | null;
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insertDocument: (collectionName: string, path: string, title: string, hash: string, createdAt: string, modifiedAt: string) => void;
|
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findActiveDocument: (collectionName: string, path: string) => { id: number; hash: string; title: string } | null;
|
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updateDocumentTitle: (documentId: number, title: string, modifiedAt: string) => void;
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updateDocument: (documentId: number, title: string, hash: string, modifiedAt: string) => void;
|
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deactivateDocument: (collectionId: number, path: string) => void;
|
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getActiveDocumentPaths: (collectionId: number) => string[];
|
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deactivateDocument: (collectionName: string, path: string) => void;
|
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getActiveDocumentPaths: (collectionName: string) => string[];
|
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|
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// Vector/embedding operations
|
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getHashesForEmbedding: () => { hash: string; body: string; path: string }[];
|
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@ -690,9 +689,11 @@ export function createStore(dbPath?: string): Store {
|
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|
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// Context
|
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getContextForFile: (filepath: string) => getContextForFile(db, filepath),
|
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getContextForPath: (collectionId: number, path: string) => getContextForPath(db, collectionId, path),
|
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getContextForPath: (collectionName: string, path: string) => getContextForPath(db, collectionName, path),
|
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getCollectionIdByName: (name: string) => getCollectionIdByName(db, name),
|
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getCollectionByName: (name: string) => getCollectionByName(db, name),
|
||||
getCollectionsWithoutContext: () => getCollectionsWithoutContext(db),
|
||||
getTopLevelPathsWithoutContext: (collectionName: string) => getTopLevelPathsWithoutContext(db, collectionName),
|
||||
|
||||
// Virtual paths
|
||||
parseVirtualPath,
|
||||
@ -724,12 +725,12 @@ export function createStore(dbPath?: string): Store {
|
||||
|
||||
// Document indexing operations
|
||||
insertContent: (hash: string, content: string, createdAt: string) => insertContent(db, hash, content, createdAt),
|
||||
insertDocument: (collectionId: number, path: string, title: string, hash: string, createdAt: string, modifiedAt: string) => insertDocument(db, collectionId, path, title, hash, createdAt, modifiedAt),
|
||||
findActiveDocument: (collectionId: number, path: string) => findActiveDocument(db, collectionId, path),
|
||||
insertDocument: (collectionName: string, path: string, title: string, hash: string, createdAt: string, modifiedAt: string) => insertDocument(db, collectionName, path, title, hash, createdAt, modifiedAt),
|
||||
findActiveDocument: (collectionName: string, path: string) => findActiveDocument(db, collectionName, path),
|
||||
updateDocumentTitle: (documentId: number, title: string, modifiedAt: string) => updateDocumentTitle(db, documentId, title, modifiedAt),
|
||||
updateDocument: (documentId: number, title: string, hash: string, modifiedAt: string) => updateDocument(db, documentId, title, hash, modifiedAt),
|
||||
deactivateDocument: (collectionId: number, path: string) => deactivateDocument(db, collectionId, path),
|
||||
getActiveDocumentPaths: (collectionId: number) => getActiveDocumentPaths(db, collectionId),
|
||||
deactivateDocument: (collectionName: string, path: string) => deactivateDocument(db, collectionName, path),
|
||||
getActiveDocumentPaths: (collectionName: string) => getActiveDocumentPaths(db, collectionName),
|
||||
|
||||
// Vector/embedding operations
|
||||
getHashesForEmbedding: () => getHashesForEmbedding(db),
|
||||
@ -792,7 +793,7 @@ export type DocumentResult = {
|
||||
title: string; // Document title (from first heading or filename)
|
||||
context: string | null; // Folder context description if configured
|
||||
hash: string; // Content hash for caching/change detection
|
||||
collectionId: number; // Parent collection ID
|
||||
collectionName: string; // Parent collection name
|
||||
modifiedAt: string; // Last modification timestamp
|
||||
bodyLength: number; // Body length in bytes (useful before loading)
|
||||
body?: string; // Document body (optional, load with getDocumentBody)
|
||||
@ -1068,7 +1069,7 @@ export function insertContent(db: Database, hash: string, content: string, creat
|
||||
*/
|
||||
export function insertDocument(
|
||||
db: Database,
|
||||
collectionId: number,
|
||||
collectionName: string,
|
||||
path: string,
|
||||
title: string,
|
||||
hash: string,
|
||||
@ -1076,23 +1077,23 @@ export function insertDocument(
|
||||
modifiedAt: string
|
||||
): void {
|
||||
db.prepare(`
|
||||
INSERT INTO documents (collection_id, path, title, hash, created_at, modified_at, active)
|
||||
INSERT INTO documents (collection, path, title, hash, created_at, modified_at, active)
|
||||
VALUES (?, ?, ?, ?, ?, ?, 1)
|
||||
`).run(collectionId, path, title, hash, createdAt, modifiedAt);
|
||||
`).run(collectionName, path, title, hash, createdAt, modifiedAt);
|
||||
}
|
||||
|
||||
/**
|
||||
* Find an active document by collection ID and path.
|
||||
* Find an active document by collection name and path.
|
||||
*/
|
||||
export function findActiveDocument(
|
||||
db: Database,
|
||||
collectionId: number,
|
||||
collectionName: string,
|
||||
path: string
|
||||
): { id: number; hash: string; title: string } | null {
|
||||
return db.prepare(`
|
||||
SELECT id, hash, title FROM documents
|
||||
WHERE collection_id = ? AND path = ? AND active = 1
|
||||
`).get(collectionId, path) as { id: number; hash: string; title: string } | null;
|
||||
WHERE collection = ? AND path = ? AND active = 1
|
||||
`).get(collectionName, path) as { id: number; hash: string; title: string } | null;
|
||||
}
|
||||
|
||||
/**
|
||||
@ -1126,18 +1127,18 @@ export function updateDocument(
|
||||
/**
|
||||
* Deactivate a document (mark as inactive but don't delete).
|
||||
*/
|
||||
export function deactivateDocument(db: Database, collectionId: number, path: string): void {
|
||||
db.prepare(`UPDATE documents SET active = 0 WHERE collection_id = ? AND path = ? AND active = 1`)
|
||||
.run(collectionId, path);
|
||||
export function deactivateDocument(db: Database, collectionName: string, path: string): void {
|
||||
db.prepare(`UPDATE documents SET active = 0 WHERE collection = ? AND path = ? AND active = 1`)
|
||||
.run(collectionName, path);
|
||||
}
|
||||
|
||||
/**
|
||||
* Get all active document paths for a collection.
|
||||
*/
|
||||
export function getActiveDocumentPaths(db: Database, collectionId: number): string[] {
|
||||
export function getActiveDocumentPaths(db: Database, collectionName: string): string[] {
|
||||
const rows = db.prepare(`
|
||||
SELECT path FROM documents WHERE collection_id = ? AND active = 1
|
||||
`).all(collectionId) as { path: string }[];
|
||||
SELECT path FROM documents WHERE collection = ? AND active = 1
|
||||
`).all(collectionName) as { path: string }[];
|
||||
return rows.map(r => r.path);
|
||||
}
|
||||
|
||||
@ -1227,7 +1228,11 @@ function levenshtein(a: string, b: string): number {
|
||||
}
|
||||
|
||||
export function findSimilarFiles(db: Database, query: string, maxDistance: number = 3, limit: number = 5): string[] {
|
||||
const allFiles = db.prepare(`SELECT display_path FROM documents WHERE active = 1`).all() as { display_path: string }[];
|
||||
const allFiles = db.prepare(`
|
||||
SELECT 'qmd://' || d.collection || '/' || d.path as display_path
|
||||
FROM documents d
|
||||
WHERE d.active = 1
|
||||
`).all() as { display_path: string }[];
|
||||
const queryLower = query.toLowerCase();
|
||||
const scored = allFiles
|
||||
.map(f => ({ path: f.display_path, dist: levenshtein(f.display_path.toLowerCase(), queryLower) }))
|
||||
@ -1240,15 +1245,13 @@ export function findSimilarFiles(db: Database, query: string, maxDistance: numbe
|
||||
export function matchFilesByGlob(db: Database, pattern: string): { filepath: string; displayPath: string; bodyLength: number }[] {
|
||||
const allFiles = db.prepare(`
|
||||
SELECT
|
||||
'qmd://' || c.name || '/' || d.path as virtual_path,
|
||||
'qmd://' || d.collection || '/' || d.path as virtual_path,
|
||||
LENGTH(content.doc) as body_length,
|
||||
d.collection_id,
|
||||
d.path
|
||||
FROM documents d
|
||||
JOIN collections c ON c.id = d.collection_id
|
||||
JOIN content ON content.hash = d.hash
|
||||
WHERE d.active = 1
|
||||
`).all() as { virtual_path: string; body_length: number; collection_id: number; path: string }[];
|
||||
`).all() as { virtual_path: string; body_length: number; path: string }[];
|
||||
|
||||
const glob = new Glob(pattern);
|
||||
return allFiles
|
||||
@ -1270,11 +1273,15 @@ export function matchFilesByGlob(db: Database, pattern: string): { filepath: str
|
||||
* For example, context at "/talks" applies to "/talks/2024/keynote.md".
|
||||
*
|
||||
* @param db Database instance
|
||||
* @param collectionId Collection ID
|
||||
* @param collectionName Collection name
|
||||
* @param path Relative path within the collection
|
||||
* @returns Context string or null if no context is defined
|
||||
*/
|
||||
export function getContextForPath(db: Database, collectionId: number, path: string): string | null {
|
||||
export function getContextForPath(db: Database, collectionName: string, path: string): string | null {
|
||||
// First get the collection_id from the collection name
|
||||
const coll = db.prepare(`SELECT id FROM collections WHERE name = ?`).get(collectionName) as { id: number } | null;
|
||||
if (!coll) return null;
|
||||
|
||||
// Find the most specific (longest) matching path prefix for this collection
|
||||
const result = db.prepare(`
|
||||
SELECT context FROM path_contexts
|
||||
@ -1282,7 +1289,7 @@ export function getContextForPath(db: Database, collectionId: number, path: stri
|
||||
AND (? LIKE path_prefix || '/%' OR ? = path_prefix OR path_prefix = '')
|
||||
ORDER BY LENGTH(path_prefix) DESC
|
||||
LIMIT 1
|
||||
`).get(collectionId, path, path) as { context: string } | null;
|
||||
`).get(coll.id, path, path) as { context: string } | null;
|
||||
return result?.context || null;
|
||||
}
|
||||
|
||||
@ -1290,17 +1297,17 @@ export function getContextForPath(db: Database, collectionId: number, path: stri
|
||||
* Legacy function for backward compatibility - resolves filepath to collection+path first
|
||||
*/
|
||||
export function getContextForFile(db: Database, filepath: string): string | null {
|
||||
// Try to find the document to get its collection_id and path
|
||||
// Try to find the document to get its collection name and path
|
||||
const doc = db.prepare(`
|
||||
SELECT d.collection_id, d.path
|
||||
SELECT d.collection, d.path
|
||||
FROM documents d
|
||||
JOIN collections c ON c.id = d.collection_id
|
||||
JOIN collections c ON c.name = d.collection
|
||||
WHERE c.pwd || '/' || d.path = ? AND d.active = 1
|
||||
LIMIT 1
|
||||
`).get(filepath) as { collection_id: number; path: string } | null;
|
||||
`).get(filepath) as { collection: string; path: string } | null;
|
||||
|
||||
if (!doc) return null;
|
||||
return getContextForPath(db, doc.collection_id, doc.path);
|
||||
return getContextForPath(db, doc.collection, doc.path);
|
||||
}
|
||||
|
||||
/**
|
||||
@ -1334,7 +1341,7 @@ export function listCollections(db: Database): { id: number; name: string; pwd:
|
||||
SUM(CASE WHEN d.active = 1 THEN 1 ELSE 0 END) as active_count,
|
||||
MAX(d.modified_at) as last_modified
|
||||
FROM collections c
|
||||
LEFT JOIN documents d ON d.collection_id = c.id
|
||||
LEFT JOIN documents d ON d.collection = c.name
|
||||
GROUP BY c.id
|
||||
ORDER BY c.name
|
||||
`).all() as { id: number; name: string; pwd: string; glob_pattern: string; created_at: string; updated_at: string; doc_count: number; active_count: number; last_modified: string | null }[];
|
||||
@ -1342,8 +1349,14 @@ export function listCollections(db: Database): { id: number; name: string; pwd:
|
||||
}
|
||||
|
||||
export function removeCollection(db: Database, collectionId: number): { deletedDocs: number; cleanedHashes: number } {
|
||||
// Get collection name first
|
||||
const coll = db.prepare(`SELECT name FROM collections WHERE id = ?`).get(collectionId) as { name: string } | null;
|
||||
if (!coll) {
|
||||
return { deletedDocs: 0, cleanedHashes: 0 };
|
||||
}
|
||||
|
||||
// Delete documents
|
||||
const docResult = db.prepare(`DELETE FROM documents WHERE collection_id = ?`).run(collectionId);
|
||||
const docResult = db.prepare(`DELETE FROM documents WHERE collection = ?`).run(coll.name);
|
||||
|
||||
// Delete contexts
|
||||
db.prepare(`DELETE FROM path_contexts WHERE collection_id = ?`).run(collectionId);
|
||||
@ -1364,7 +1377,17 @@ export function removeCollection(db: Database, collectionId: number): { deletedD
|
||||
}
|
||||
|
||||
export function renameCollection(db: Database, collectionId: number, newName: string): void {
|
||||
// Get old collection name first
|
||||
const coll = db.prepare(`SELECT name FROM collections WHERE id = ?`).get(collectionId) as { name: string } | null;
|
||||
if (!coll) return;
|
||||
|
||||
const now = new Date().toISOString();
|
||||
|
||||
// Update all documents with the new collection name
|
||||
db.prepare(`UPDATE documents SET collection = ? WHERE collection = ?`)
|
||||
.run(newName, coll.name);
|
||||
|
||||
// Update collection name
|
||||
db.prepare(`UPDATE collections SET name = ?, updated_at = ? WHERE id = ?`)
|
||||
.run(newName, now, collectionId);
|
||||
}
|
||||
@ -1435,7 +1458,7 @@ export function getCollectionsWithoutContext(db: Database): { id: number; name:
|
||||
const collections = db.prepare(`
|
||||
SELECT c.id, c.name, c.pwd, COUNT(d.id) as doc_count
|
||||
FROM collections c
|
||||
LEFT JOIN documents d ON d.collection_id = c.id AND d.active = 1
|
||||
LEFT JOIN documents d ON d.collection = c.name AND d.active = 1
|
||||
WHERE NOT EXISTS (
|
||||
SELECT 1 FROM path_contexts pc WHERE pc.collection_id = c.id
|
||||
)
|
||||
@ -1449,17 +1472,21 @@ export function getCollectionsWithoutContext(db: Database): { id: number; name:
|
||||
* Get top-level directories in a collection that don't have context.
|
||||
* Useful for suggesting where context might be needed.
|
||||
*/
|
||||
export function getTopLevelPathsWithoutContext(db: Database, collectionId: number): string[] {
|
||||
export function getTopLevelPathsWithoutContext(db: Database, collectionName: string): string[] {
|
||||
// First get the collection_id from the collection name
|
||||
const coll = db.prepare(`SELECT id FROM collections WHERE name = ?`).get(collectionName) as { id: number } | null;
|
||||
if (!coll) return [];
|
||||
|
||||
// Get all paths in the collection
|
||||
const paths = db.prepare(`
|
||||
SELECT DISTINCT path FROM documents
|
||||
WHERE collection_id = ? AND active = 1
|
||||
`).all(collectionId) as { path: string }[];
|
||||
WHERE collection = ? AND active = 1
|
||||
`).all(collectionName) as { path: string }[];
|
||||
|
||||
// Get existing contexts for this collection
|
||||
const contexts = db.prepare(`
|
||||
SELECT path_prefix FROM path_contexts WHERE collection_id = ?
|
||||
`).all(collectionId) as { path_prefix: string }[];
|
||||
`).all(coll.id) as { path_prefix: string }[];
|
||||
|
||||
const contextPrefixes = new Set(contexts.map(c => c.path_prefix));
|
||||
|
||||
@ -1516,22 +1543,25 @@ export function searchFTS(db: Database, query: string, limit: number = 20, colle
|
||||
|
||||
let sql = `
|
||||
SELECT
|
||||
'qmd://' || c.name || '/' || d.path as filepath,
|
||||
'qmd://' || c.name || '/' || d.path as display_path,
|
||||
'qmd://' || d.collection || '/' || d.path as filepath,
|
||||
'qmd://' || d.collection || '/' || d.path as display_path,
|
||||
d.title,
|
||||
content.doc as body,
|
||||
bm25(documents_fts, 10.0, 1.0) as score
|
||||
FROM documents_fts f
|
||||
JOIN documents d ON d.id = f.rowid
|
||||
JOIN collections c ON c.id = d.collection_id
|
||||
JOIN content ON content.hash = d.hash
|
||||
WHERE documents_fts MATCH ? AND d.active = 1
|
||||
`;
|
||||
const params: (string | number)[] = [ftsQuery];
|
||||
|
||||
if (collectionId !== undefined) {
|
||||
sql += ` AND d.collection_id = ?`;
|
||||
params.push(collectionId);
|
||||
// Convert collectionId to collection name for filtering
|
||||
const coll = db.prepare(`SELECT name FROM collections WHERE id = ?`).get(collectionId) as { name: string } | null;
|
||||
if (coll) {
|
||||
sql += ` AND d.collection = ?`;
|
||||
params.push(coll.name);
|
||||
}
|
||||
}
|
||||
|
||||
sql += ` ORDER BY score LIMIT ?`;
|
||||
@ -1541,10 +1571,15 @@ export function searchFTS(db: Database, query: string, limit: number = 20, colle
|
||||
|
||||
const maxScore = rows.length > 0 ? Math.max(...rows.map(r => Math.abs(r.score))) : 1;
|
||||
return rows.map(row => ({
|
||||
file: row.filepath,
|
||||
filepath: row.filepath,
|
||||
displayPath: row.display_path,
|
||||
title: row.title,
|
||||
hash: "", // Not available in FTS query
|
||||
collectionName: row.filepath.split('//')[1]?.split('/')[0] || "", // Extract from virtual path
|
||||
modifiedAt: "", // Not available in FTS query
|
||||
bodyLength: row.body.length,
|
||||
body: row.body,
|
||||
context: null, // Not loaded in FTS
|
||||
score: Math.abs(row.score) / maxScore,
|
||||
source: "fts" as const,
|
||||
}));
|
||||
@ -1566,21 +1601,24 @@ export async function searchVec(db: Database, query: string, model: string, limi
|
||||
SELECT
|
||||
v.hash_seq,
|
||||
v.distance,
|
||||
'qmd://' || c.name || '/' || d.path as filepath,
|
||||
'qmd://' || c.name || '/' || d.path as display_path,
|
||||
'qmd://' || d.collection || '/' || d.path as filepath,
|
||||
'qmd://' || d.collection || '/' || d.path as display_path,
|
||||
d.title,
|
||||
content.doc as body,
|
||||
cv.pos
|
||||
FROM vectors_vec v
|
||||
JOIN content_vectors cv ON cv.hash || '_' || cv.seq = v.hash_seq
|
||||
JOIN documents d ON d.hash = cv.hash AND d.active = 1
|
||||
JOIN collections c ON c.id = d.collection_id
|
||||
JOIN content ON content.hash = d.hash
|
||||
WHERE v.embedding MATCH ? AND k = ?
|
||||
`;
|
||||
|
||||
if (collectionId !== undefined) {
|
||||
sql += ` AND d.collection_id = ${collectionId}`;
|
||||
// Convert collectionId to collection name for filtering
|
||||
const coll = db.prepare(`SELECT name FROM collections WHERE id = ?`).get(collectionId) as { name: string } | null;
|
||||
if (coll) {
|
||||
sql += ` AND d.collection = '${coll.name}'`;
|
||||
}
|
||||
}
|
||||
|
||||
sql += ` ORDER BY v.distance`;
|
||||
@ -1599,10 +1637,15 @@ export async function searchVec(db: Database, query: string, model: string, limi
|
||||
.sort((a, b) => a.bestDist - b.bestDist)
|
||||
.slice(0, limit)
|
||||
.map(({ row }) => ({
|
||||
file: row.filepath,
|
||||
filepath: row.filepath,
|
||||
displayPath: row.display_path,
|
||||
title: row.title,
|
||||
hash: "", // Not available in vec query
|
||||
collectionName: row.filepath.split('//')[1]?.split('/')[0] || "", // Extract from virtual path
|
||||
modifiedAt: "", // Not available in vec query
|
||||
bodyLength: row.body.length,
|
||||
body: row.body,
|
||||
context: null, // Not loaded in vec
|
||||
score: 1 / (1 + row.distance),
|
||||
source: "vec" as const,
|
||||
chunkPos: row.pos,
|
||||
@ -1782,7 +1825,7 @@ type DbDocRow = {
|
||||
display_path: string;
|
||||
title: string;
|
||||
hash: string;
|
||||
collection_id: number;
|
||||
collection: string;
|
||||
modified_at: string;
|
||||
body_length: number;
|
||||
body?: string;
|
||||
@ -1803,20 +1846,48 @@ export function findDocument(db: Database, filename: string, options: { includeB
|
||||
filepath = homedir() + filepath.slice(1);
|
||||
}
|
||||
|
||||
const selectCols = options.includeBody
|
||||
? `filepath, display_path, title, hash, collection_id, modified_at, LENGTH(body) as body_length, body`
|
||||
: `filepath, display_path, title, hash, collection_id, modified_at, LENGTH(body) as body_length`;
|
||||
const bodyCol = options.includeBody ? `, content.doc as body` : ``;
|
||||
|
||||
// Build computed columns for filepath and display_path
|
||||
const selectCols = `
|
||||
c.pwd || '/' || d.path as filepath,
|
||||
'qmd://' || d.collection || '/' || d.path as display_path,
|
||||
d.title,
|
||||
d.hash,
|
||||
d.collection,
|
||||
d.modified_at,
|
||||
LENGTH(content.doc) as body_length
|
||||
${bodyCol}
|
||||
`;
|
||||
|
||||
// Try various match strategies - always join content for body_length
|
||||
let doc = db.prepare(`
|
||||
SELECT ${selectCols}
|
||||
FROM documents d
|
||||
JOIN collections c ON c.name = d.collection
|
||||
JOIN content ON content.hash = d.hash
|
||||
WHERE c.pwd || '/' || d.path = ? AND d.active = 1
|
||||
`).get(filepath) as DbDocRow | null;
|
||||
|
||||
// Try various match strategies
|
||||
let doc = db.prepare(`SELECT ${selectCols} FROM documents WHERE filepath = ? AND active = 1`).get(filepath) as DbDocRow | null;
|
||||
if (!doc) {
|
||||
doc = db.prepare(`SELECT ${selectCols} FROM documents WHERE display_path = ? AND active = 1`).get(filepath) as DbDocRow | null;
|
||||
doc = db.prepare(`
|
||||
SELECT ${selectCols}
|
||||
FROM documents d
|
||||
JOIN collections c ON c.name = d.collection
|
||||
JOIN content ON content.hash = d.hash
|
||||
WHERE 'qmd://' || d.collection || '/' || d.path = ? AND d.active = 1
|
||||
`).get(filepath) as DbDocRow | null;
|
||||
}
|
||||
|
||||
if (!doc) {
|
||||
doc = db.prepare(`SELECT ${selectCols} FROM documents WHERE filepath LIKE ? AND active = 1 LIMIT 1`).get(`%${filepath}`) as DbDocRow | null;
|
||||
}
|
||||
if (!doc) {
|
||||
doc = db.prepare(`SELECT ${selectCols} FROM documents WHERE display_path LIKE ? AND active = 1 LIMIT 1`).get(`%${filepath}`) as DbDocRow | null;
|
||||
doc = db.prepare(`
|
||||
SELECT ${selectCols}
|
||||
FROM documents d
|
||||
JOIN collections c ON c.name = d.collection
|
||||
JOIN content ON content.hash = d.hash
|
||||
WHERE (c.pwd || '/' || d.path LIKE ? OR 'qmd://' || d.collection || '/' || d.path LIKE ?) AND d.active = 1
|
||||
LIMIT 1
|
||||
`).get(`%${filepath}`, `%${filepath}`) as DbDocRow | null;
|
||||
}
|
||||
|
||||
if (!doc) {
|
||||
@ -1832,7 +1903,7 @@ export function findDocument(db: Database, filename: string, options: { includeB
|
||||
title: doc.title,
|
||||
context,
|
||||
hash: doc.hash,
|
||||
collectionId: doc.collection_id,
|
||||
collectionName: doc.collection,
|
||||
modifiedAt: doc.modified_at,
|
||||
bodyLength: doc.body_length,
|
||||
...(options.includeBody && doc.body !== undefined && { body: doc.body }),
|
||||
@ -1845,7 +1916,13 @@ export function findDocument(db: Database, filename: string, options: { includeB
|
||||
*/
|
||||
export function getDocumentBody(db: Database, doc: DocumentResult | { filepath: string }, fromLine?: number, maxLines?: number): string | null {
|
||||
const filepath = 'filepath' in doc ? doc.filepath : doc.filepath;
|
||||
const row = db.prepare(`SELECT body FROM documents WHERE filepath = ? AND active = 1`).get(filepath) as { body: string } | null;
|
||||
const row = db.prepare(`
|
||||
SELECT content.doc as body
|
||||
FROM documents d
|
||||
JOIN collections c ON c.name = d.collection
|
||||
JOIN content ON content.hash = d.hash
|
||||
WHERE c.pwd || '/' || d.path = ? AND d.active = 1
|
||||
`).get(filepath) as { body: string } | null;
|
||||
if (!row) return null;
|
||||
|
||||
let body = row.body;
|
||||
@ -1900,9 +1977,17 @@ export function findDocuments(
|
||||
const errors: string[] = [];
|
||||
const maxBytes = options.maxBytes ?? DEFAULT_MULTI_GET_MAX_BYTES;
|
||||
|
||||
const selectCols = options.includeBody
|
||||
? `filepath, display_path, title, hash, collection_id, modified_at, LENGTH(body) as body_length, body`
|
||||
: `filepath, display_path, title, hash, collection_id, modified_at, LENGTH(body) as body_length`;
|
||||
const bodyCol = options.includeBody ? `, content.doc as body` : ``;
|
||||
const selectCols = `
|
||||
c.pwd || '/' || d.path as filepath,
|
||||
'qmd://' || d.collection || '/' || d.path as display_path,
|
||||
d.title,
|
||||
d.hash,
|
||||
d.collection,
|
||||
d.modified_at,
|
||||
LENGTH(content.doc) as body_length
|
||||
${bodyCol}
|
||||
`;
|
||||
|
||||
let fileRows: DbDocRow[];
|
||||
|
||||
@ -1910,9 +1995,22 @@ export function findDocuments(
|
||||
const names = pattern.split(',').map(s => s.trim()).filter(Boolean);
|
||||
fileRows = [];
|
||||
for (const name of names) {
|
||||
let doc = db.prepare(`SELECT ${selectCols} FROM documents WHERE display_path = ? AND active = 1`).get(name) as DbDocRow | null;
|
||||
let doc = db.prepare(`
|
||||
SELECT ${selectCols}
|
||||
FROM documents d
|
||||
JOIN collections c ON c.name = d.collection
|
||||
JOIN content ON content.hash = d.hash
|
||||
WHERE 'qmd://' || d.collection || '/' || d.path = ? AND d.active = 1
|
||||
`).get(name) as DbDocRow | null;
|
||||
if (!doc) {
|
||||
doc = db.prepare(`SELECT ${selectCols} FROM documents WHERE display_path LIKE ? AND active = 1 LIMIT 1`).get(`%${name}`) as DbDocRow | null;
|
||||
doc = db.prepare(`
|
||||
SELECT ${selectCols}
|
||||
FROM documents d
|
||||
JOIN collections c ON c.name = d.collection
|
||||
JOIN content ON content.hash = d.hash
|
||||
WHERE 'qmd://' || d.collection || '/' || d.path LIKE ? AND d.active = 1
|
||||
LIMIT 1
|
||||
`).get(`%${name}`) as DbDocRow | null;
|
||||
}
|
||||
if (doc) {
|
||||
fileRows.push(doc);
|
||||
@ -1932,9 +2030,15 @@ export function findDocuments(
|
||||
errors.push(`No files matched pattern: ${pattern}`);
|
||||
return { docs: [], errors };
|
||||
}
|
||||
const filepaths = matched.map(m => m.filepath);
|
||||
const placeholders = filepaths.map(() => '?').join(',');
|
||||
fileRows = db.prepare(`SELECT ${selectCols} FROM documents WHERE filepath IN (${placeholders}) AND active = 1`).all(...filepaths) as DbDocRow[];
|
||||
const virtualPaths = matched.map(m => m.filepath);
|
||||
const placeholders = virtualPaths.map(() => '?').join(',');
|
||||
fileRows = db.prepare(`
|
||||
SELECT ${selectCols}
|
||||
FROM documents d
|
||||
JOIN collections c ON c.name = d.collection
|
||||
JOIN content ON content.hash = d.hash
|
||||
WHERE 'qmd://' || d.collection || '/' || d.path IN (${placeholders}) AND d.active = 1
|
||||
`).all(...virtualPaths) as DbDocRow[];
|
||||
}
|
||||
|
||||
const results: MultiGetResult[] = [];
|
||||
@ -1958,7 +2062,7 @@ export function findDocuments(
|
||||
title: row.title || row.display_path.split('/').pop() || row.display_path,
|
||||
context,
|
||||
hash: row.hash,
|
||||
collectionId: row.collection_id,
|
||||
collectionName: row.collection,
|
||||
modifiedAt: row.modified_at,
|
||||
bodyLength: row.body_length,
|
||||
...(options.includeBody && row.body !== undefined && { body: row.body }),
|
||||
@ -2039,7 +2143,7 @@ export function getStatus(db: Database): IndexStatus {
|
||||
COUNT(d.id) as active_count,
|
||||
MAX(d.modified_at) as last_doc_update
|
||||
FROM collections c
|
||||
LEFT JOIN documents d ON d.collection_id = c.id AND d.active = 1
|
||||
LEFT JOIN documents d ON d.collection = c.name AND d.active = 1
|
||||
GROUP BY c.id
|
||||
ORDER BY last_doc_update DESC
|
||||
`).all() as { id: number; pwd: string; glob_pattern: string; created_at: string; active_count: number; last_doc_update: string | null }[];
|
||||
|
||||
Loading…
Reference in New Issue
Block a user